Hard to categorize this one. Although the Shop price per item was expanded to a 5 digit number, the cheat dialog for Link's maximum rupee count in the L3 Cheat options is still hard-coded at 3 digits. Naturally, that's the field that's the most likely to rise well into the four-digit range, given sufficient ambition and a bit of a hoarder mentality.
Cheat Rupee Max is 3 Digits.
Fixed.